SUPPLEMENTARY INFORMATION



[1] Ramachandra M.Bhaskara, Alexandre de Brevern & Narayanaswamy Srinivasan (2012) Supplementary Information for "Understanding the role of domain-domain linkers in the spatial orientation of domains in multi-domain proteins".


[2] Govindarajan Sudha, Subburaj Yamunadevi, Nidhi Tyagi, Saumitra Das & Narayanaswamy Srinivasan (2012) Supplementary Information for "Structural and Molecular Basis of Interaction of HCV non-structural protein 5A with human casein kinase 1-aplha and PKR."


[3] G. N. Ramachandran & V. Sasisekharan, Advances in protein chemistry, Vol 23, (1968) Supplementary Information for "Conformation of polypeptides and proteins."


[4] 3D Model structure of HCV IRES protein interactions


[5] Dataset for assessment of designed sequences


[6] The files available in this web site pertains to the manuscript entitled
"Re-analysis of cryoEM data on HCV IRES bound to 40S subunit of human ribosome integrated with recent structural information suggests new contact regions between ribosomal proteins and HCV RNA" by *Agnel Praveen Joseph, Prasanna Bhat, Saumitra Das and Narayanaswamy Srinivasan*

*Click here for the coordinate set of models*

*Click here for the entire supplementary information including structure-based alignments*

*Click here for the zip file with distance restraint files used for the docking*











 


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